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South Sudan

MSF responded to immense medical needs amid a major upsurge in conflict and violence against civilians, as well as an exceptionally severe malaria season.



outpatient consultations


patients treated for malaria


antenatal care consultations


measles vaccinations in response to an outbreak


routine vaccinations


patients treated in feeding centres


patients on first-line ARV treatment

More than two years of sustained conflict and violence against civilians have taken a huge toll on the people of South Sudan. Over one million people have been displaced and hundreds of thousands have been unable to access medical or humanitarian assistance for months at a time, particularly in Jonglei, Unity and Upper Nile states. MSF scaled up its programmes in response, but access was disrupted repeatedly by fighting and attacks on medical facilities. Compounding this humanitarian crisis, there were frequent drug shortages, even in areas not affected by conflict, and the country also experienced one of its worst malaria seasons in years. MSF treated a total of 295,000 patients for malaria during the year – nearly ten times as many as in 2014.


Extreme levels of conflict, violence and humanitarian need

There was an escalation in conflict and violence in Unity state between April and November, forcing hundreds of thousands of people to flee their homes. Many hid in the bush and swamps and MSF received reports of executions, mass rapes, abductions and the razing of entire villages. Five South Sudanese MSF staff were killed amid the extreme levels of violence, and 13 remain unaccounted for. MSF was forced to temporarily evacuate from Nyal, in May, and twice from Leer, in May and October. As people sought shelter, the population of the UN protection of civilians site (PoC) in Bentiu in northern Unity state increased from 45,000 to over 100,000 by the end of 2015. MSF runs the only hospital in Bentiu PoC and the team rapidly expanded capacity to meet the enormous medical needs of this vulnerable population. MSF also operated mobile clinics and therapeutic feeding programmes in southern Unity state and Bentiu town whenever access was possible. Many patients suffering from severe violence-related injuries were referred to the MSF hospital in Lankien for surgical care. Thousands also fled into northern Jonglei state, where MSF opened a project in Old Fangak providing assistance in a medical centre, mobile clinics for the region and referrals by boat ambulance. MSF opened another clinic in Mayom, a remote location in northern Unity state, providing basic healthcare and secondary referrals to its hospital in Agok. Teams also responded to outbreaks of diseases including measles, malaria and meningitis in Yida refugee camp, currently home to 70,000 Sudanese refugees.

Assisting populations caught on the frontline
In Upper Nile state, the surge in conflict impacted populations accessing care in MSF’s projects along the White Nile river in Malakal, Wau Shilluk and Melut. In May, the river became a frontline and humanitarian access was severely restricted. People in Wau Shilluk had extremely limited access to assistance for months, and thousands of civilians crossed the river in search for protection and assistance. The population of the PoC site in Malakal swelled from 21,000 to 48,000 and many were forced to live in overcrowded, unsanitary and inhumane conditions. MSF runs the only hospital in the Malakal PoC and teams responded to major outbreaks of disease including malaria, respiratory tract infections and diarrhoea. In Wau Shilluk, MSF expanded the capacity of its primary healthcare centre to include secondary care, in order to meet the increased needs of the population. Elsewhere in Upper Nile state, MSF continued to provide medical assistance in Doro refugee camp for 50,000 Sudanese refugees from the conflict-affected Blue Nile state as well as the host population in Maban county. MSF handed over the medical programmes it had been running for Sudanese refugees in Batil and Gendrassa camps since 2011 to other health organisations.

MSB17642 – vaccination A young boy is vaccinated against measles at a camp for displaced people in Bahr el Ghazal.

Responding to emergencies and outbreaks of disease

For the second year running, there was an exceptionally severe malaria season across South Sudan, particularly in the northwest. The impact of the outbreak was exacerbated by severe shortages and stockouts of essential medicines in non-MSF health facilities throughout the country. MSF teams saw dramatic spikes in the disease in its projects in Agok, Aweil, Bentiu, Doro, Gogrial, Mayom and Yida and responded by rapidly increasing treatment and bed capacity, conducting large malaria outreach programmes and scaling up support to other medical facilities in the surrounding areas. South Sudan was also hit by its second outbreak of cholera in two years. In response, MSF provided treatment, technical capacity and logistical support to the cholera treatment unit in Bor hospital in Jonglei state. Another team in the capital, Juba, opened a cholera treatment centre and vaccinated over 160,000 people against the disease. In Western Equatoria state, MSF conducted mobile clinics and donated medical supplies for conflict-affected communities. In September, following the explosion of a fuel truck that killed more than 200 people and injured over 100 in Maridi, MSF provided surgical care, medical supplies and long-term nursing support for injured patients. MSF also continued to run its HIV ‘test and treat’ programme in Yambio, despite outbreaks of violence.


No. staff in 2015: 3,322 | Expenditure: €81.7 million | Year MSF first worked in the country: 1983 | | | @MSF_SouthSudan